Getting started with IBL neural data

• See docs.internationalbrainlab.org/ for a landing page and overview.
• You can find some example data and check out analyses here.
• Browse the data in this interactive visualization app.
• See here for a tutorial given at COSYNE 2024 (recording here, accessible with an IBL account).

Working with unpublished IBL data on ALICE

In our lab’s shared ALICE project space (data_pi-uraiae) live IBL data which are not available through the openalyx public dataset. You can point ONE to use this local cache using the snippet below:

from one.api import ONE
one = ONE()

# Load with ONE in local mode
save_dir = os.path.join(os.path.expanduser('~'), 'data_pi-uraiae/ONE/alyx.internationalbrainlab.org/')
one = ONE(mode='local', cache_dir=save_dir)

In the same folder, there is a file subject_info.csv with date of birth and sex for all animals to compute their age at the time of the ephys recording).